Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=7227&summary=true
{ "count": 109, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=3&q=&species=7227&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&q=&species=7227&summary=true", "results": [ { "folder": "EXP045573.0-8_h_embryo.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "0-8 h embryo" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:22895281" }, { "identifier": "GEO:GSE35648" }, { "identifier": "GEO:GSM872904" }, { "identifier": "GTRD:EXP045573" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045573.0-8_h_embryo.BEAF-32/EXP045573.0-8_h_embryo.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045573.0-8_h_embryo.BEAF-32/EXP045573.0-8_h_embryo.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045788.S2_cells.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "S2 cells" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:24486021" }, { "identifier": "GEO:GSE52962" }, { "identifier": "GEO:GSM1278639" }, { "identifier": "GTRD:EXP045788" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045788.S2_cells.BEAF-32/EXP045788.S2_cells.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045788.S2_cells.BEAF-32/EXP045788.S2_cells.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP044161.whole_organism_development_stage_embryonic.CAD", "tf_name": "CAD", "samples": [ { "cell": { "title": "whole organism (development stage: embryonic)" }, "biological_condition": "strain: Cad-GFP-7T, genotype: y[1] w[*]; PBac{y[+mDint2] w[+mC]=cad-EGFP.S}VK00033" } ], "references": [ { "identifier": "ENCODE:ENCSR004VNY" }, { "identifier": "GEO:GSM499644" }, { "identifier": "GTRD:EXP044161" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0216.2", "bed_filename": "macs/DAMO/EXP044161.whole_organism_development_stage_embryonic.CAD/EXP044161.whole_organism_development_stage_embryonic.CAD.MA0216.2.damo.bed", "fasta_filename": "macs/DAMO/EXP044161.whole_organism_development_stage_embryonic.CAD/EXP044161.whole_organism_development_stage_embryonic.CAD.MA0216.2.damo.fa", "profile_name": "cad", "synonyms": [ "38E.19", "CAD", "CAUDAL", "CG1759", "CG1759-PA", "CG1759-PB", "CG1759-PC", "Cad", "Dmel\\\\CG1759", "Dmel_CG1759", "S67", "anon-WO2004063362.83", "cad-PA", "cad-PB", "cad-PC", "caudal", "cd" ] } ] }, { "folder": "EXP040909.S2_cells.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2 cells" }, "biological_condition": "CLAMP RNAi" } ], "references": [ { "identifier": "GEO:GSM2860429" }, { "identifier": "GEO:GSM2860425" }, { "identifier": "GEO:GSE107059" }, { "identifier": "GEO:GSM2860433" }, { "identifier": "GEO:GSM2860421" }, { "identifier": "GTRD:EXP040909" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP040909.S2_cells.CLAMP/EXP040909.S2_cells.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP040909.S2_cells.CLAMP/EXP040909.S2_cells.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP040912.S2_cells.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2 cells" }, "biological_condition": "GFP RNAi" } ], "references": [ { "identifier": "GEO:GSM2860397" }, { "identifier": "GEO:GSM2860389" }, { "identifier": "GEO:GSE107059" }, { "identifier": "GEO:GSM2860393" }, { "identifier": "GEO:GSM2860401" }, { "identifier": "GTRD:EXP040912" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP040912.S2_cells.CLAMP/EXP040912.S2_cells.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP040912.S2_cells.CLAMP/EXP040912.S2_cells.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP040915.S2_cells.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2 cells" }, "biological_condition": "GAF RNAi" } ], "references": [ { "identifier": "GEO:GSM2860405" }, { "identifier": "GEO:GSM2860409" }, { "identifier": "GEO:GSM2860413" }, { "identifier": "GEO:GSE107059" }, { "identifier": "GEO:GSM2860417" }, { "identifier": "GTRD:EXP040915" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP040915.S2_cells.CLAMP/EXP040915.S2_cells.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP040915.S2_cells.CLAMP/EXP040915.S2_cells.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP045610.Kc167_development_stage_embryonic.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "control RNAi " } ], "references": [ { "identifier": "GEO:GSE39271" }, { "identifier": "PUBMED:23873939" }, { "identifier": "GEO:GSM959256" }, { "identifier": "GEO:GSM959258" }, { "identifier": "GTRD:EXP045610" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP045610.Kc167_development_stage_embryonic.CLAMP/EXP045610.Kc167_development_stage_embryonic.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045610.Kc167_development_stage_embryonic.CLAMP/EXP045610.Kc167_development_stage_embryonic.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP045611.S2-DGRC_embryonic_stem_cells.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2-DGRC (embryonic stem cells)" }, "biological_condition": "MSL2 RNAi" } ], "references": [ { "identifier": "GEO:GSE39271" }, { "identifier": "GEO:GSM959262" }, { "identifier": "PUBMED:23873939" }, { "identifier": "GEO:GSM959260" }, { "identifier": "GTRD:EXP045611" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP045611.S2-DGRC_embryonic_stem_cells.CLAMP/EXP045611.S2-DGRC_embryonic_stem_cells.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045611.S2-DGRC_embryonic_stem_cells.CLAMP/EXP045611.S2-DGRC_embryonic_stem_cells.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP045612.S2-DGRC_embryonic_stem_cells.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2-DGRC (embryonic stem cells)" }, "biological_condition": "control RNAi" } ], "references": [ { "identifier": "GEO:GSE39271" }, { "identifier": "PUBMED:23873939" }, { "identifier": "GEO:GSM959264" }, { "identifier": "GEO:GSM959266" }, { "identifier": "GTRD:EXP045612" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP045612.S2-DGRC_embryonic_stem_cells.CLAMP/EXP045612.S2-DGRC_embryonic_stem_cells.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045612.S2-DGRC_embryonic_stem_cells.CLAMP/EXP045612.S2-DGRC_embryonic_stem_cells.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP046202.whole_organism_developmental_stage_L3.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "whole organism (developmental stage: L3)" }, "biological_condition": "gender: female" } ], "references": [ { "identifier": "GEO:GSM2203001" }, { "identifier": "PUBMED:27414415" }, { "identifier": "GEO:GSE83435" }, { "identifier": "GTRD:EXP046202" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP046202.whole_organism_developmental_stage_L3.CLAMP/EXP046202.whole_organism_developmental_stage_L3.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP046202.whole_organism_developmental_stage_L3.CLAMP/EXP046202.whole_organism_developmental_stage_L3.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] } ] }