Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=6239&summary=true
{ "count": 91, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=3&q=&species=6239&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&q=&species=6239&summary=true", "results": [ { "folder": "EXP044310.Whole_worms_mix_stage_culture.DAF-16", "tf_name": "DAF-16", "samples": [ { "cell": { "title": "Whole worms (mix stage culture)" }, "biological_condition": "strain: daf-2 (e1370); temperature:20 °C" } ], "references": [ { "identifier": "GEO:GSM1558630" }, { "identifier": "GEO:GSE63865" }, { "identifier": "PUBMED:26539642" }, { "identifier": "GTRD:EXP044310" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1446.1", "bed_filename": "macs/DAMO/EXP044310.Whole_worms_mix_stage_culture.DAF-16/EXP044310.Whole_worms_mix_stage_culture.DAF-16.MA1446.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044310.Whole_worms_mix_stage_culture.DAF-16/EXP044310.Whole_worms_mix_stage_culture.DAF-16.MA1446.1.damo.fa", "profile_name": "daf-16", "synonyms": [ "CELE_R13H8.1", "Fork-head domain-containing protein;Forkhead box protein O" ] } ] }, { "folder": "EXP044311.Whole_worms_mix_stage_culture.DAF-16", "tf_name": "DAF-16", "samples": [ { "cell": { "title": "Whole worms (mix stage culture)" }, "biological_condition": "strain: Wild-type (N2); temperature:20 °C" } ], "references": [ { "identifier": "GEO:GSE63865" }, { "identifier": "GEO:GSM1659890" }, { "identifier": "PUBMED:26539642" }, { "identifier": "GTRD:EXP044311" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1446.1", "bed_filename": "macs/DAMO/EXP044311.Whole_worms_mix_stage_culture.DAF-16/EXP044311.Whole_worms_mix_stage_culture.DAF-16.MA1446.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044311.Whole_worms_mix_stage_culture.DAF-16/EXP044311.Whole_worms_mix_stage_culture.DAF-16.MA1446.1.damo.fa", "profile_name": "daf-16", "synonyms": [ "CELE_R13H8.1", "Fork-head domain-containing protein;Forkhead box protein O" ] } ] }, { "folder": "EXP044313.Whole_worms_mix_stage_culture.DAF-16", "tf_name": "DAF-16", "samples": [ { "cell": { "title": "Whole worms (mix stage culture)" }, "biological_condition": "strain: daf-16(mgDf50) knocked down by RNAi; temperature:20 °C" } ], "references": [ { "identifier": "GEO:GSM1659894" }, { "identifier": "GEO:GSE63865" }, { "identifier": "PUBMED:26539642" }, { "identifier": "GTRD:EXP044313" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1446.1", "bed_filename": "macs/DAMO/EXP044313.Whole_worms_mix_stage_culture.DAF-16/EXP044313.Whole_worms_mix_stage_culture.DAF-16.MA1446.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044313.Whole_worms_mix_stage_culture.DAF-16/EXP044313.Whole_worms_mix_stage_culture.DAF-16.MA1446.1.damo.fa", "profile_name": "daf-16", "synonyms": [ "CELE_R13H8.1", "Fork-head domain-containing protein;Forkhead box protein O" ] } ] }, { "folder": "ENCSR147FKU.Whole_worms_mixed-stage_embryos.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (mixed-stage embryos)" }, "biological_condition": "strain: OP32, genotype: unc-119(ed3) III; wgIs32, sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR147FKU" }, { "identifier": "GTRD:EXP043623" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/ENCSR147FKU.Whole_worms_mixed-stage_embryos.DPY-27/ENCSR147FKU.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR147FKU.Whole_worms_mixed-stage_embryos.DPY-27/ENCSR147FKU.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] }, { "folder": "EXP042316.Whole_worms_developmental_stage_embryo.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (developmental stage: embryo)" }, "biological_condition": "strain: OP32; DPY27 transgenic worms (GFP-tagged)" } ], "references": [ { "identifier": "GEO:GSE15501" }, { "identifier": "GEO:GSM388726" }, { "identifier": "GTRD:EXP042316" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/EXP042316.Whole_worms_developmental_stage_embryo.DPY-27/EXP042316.Whole_worms_developmental_stage_embryo.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/EXP042316.Whole_worms_developmental_stage_embryo.DPY-27/EXP042316.Whole_worms_developmental_stage_embryo.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] }, { "folder": "EXP042496.Whole_worms_mixed-stage_embryos.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (mixed-stage embryos)" }, "biological_condition": "N2 strain" } ], "references": [ { "identifier": "GEO:GSM1111780" }, { "identifier": "GEO:GSM1111778" }, { "identifier": "PUBMED:24125077" }, { "identifier": "GEO:GSM1111777" }, { "identifier": "GEO:GSE45678" }, { "identifier": "GEO:GSM1111779" }, { "identifier": "GTRD:EXP042496" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/EXP042496.Whole_worms_mixed-stage_embryos.DPY-27/EXP042496.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/EXP042496.Whole_worms_mixed-stage_embryos.DPY-27/EXP042496.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] }, { "folder": "EXP044357.Whole_worms_developmental_stage_embryo.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (developmental stage: embryo)" }, "biological_condition": "CB428 strain" } ], "references": [ { "identifier": "GEO:GSM1652671" }, { "identifier": "PUBMED:27356611" }, { "identifier": "GEO:GSM1652673" }, { "identifier": "GEO:GSM1652672" }, { "identifier": "PUBMED:26641248" }, { "identifier": "GEO:GSE67650" }, { "identifier": "GTRD:EXP044357" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/EXP044357.Whole_worms_developmental_stage_embryo.DPY-27/EXP044357.Whole_worms_developmental_stage_embryo.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044357.Whole_worms_developmental_stage_embryo.DPY-27/EXP044357.Whole_worms_developmental_stage_embryo.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] }, { "folder": "EXP044358.Whole_worms_developmental_stage_embryo.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (developmental stage: embryo)" }, "biological_condition": "MT14911 strain" } ], "references": [ { "identifier": "GEO:GSE67650" }, { "identifier": "GEO:GSM1652674" }, { "identifier": "PUBMED:26641248" }, { "identifier": "GEO:GSM1652675" }, { "identifier": "PUBMED:27356611" }, { "identifier": "GTRD:EXP044358" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/EXP044358.Whole_worms_developmental_stage_embryo.DPY-27/EXP044358.Whole_worms_developmental_stage_embryo.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044358.Whole_worms_developmental_stage_embryo.DPY-27/EXP044358.Whole_worms_developmental_stage_embryo.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] }, { "folder": "EXP044478.Whole_worms_mixed-stage_embryos.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (mixed-stage embryos)" }, "biological_condition": "N2 strain" } ], "references": [ { "identifier": "GEO:GSM2339609" }, { "identifier": "GEO:GSE87741" }, { "identifier": "GTRD:EXP044478" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/EXP044478.Whole_worms_mixed-stage_embryos.DPY-27/EXP044478.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044478.Whole_worms_mixed-stage_embryos.DPY-27/EXP044478.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] }, { "folder": "EXP044480.Whole_worms_mixed-stage_embryos.DPY-27", "tf_name": "DPY-27", "samples": [ { "cell": { "title": "Whole worms (mixed-stage embryos)" }, "biological_condition": "N2 strain" } ], "references": [ { "identifier": "GEO:GSE87741" }, { "identifier": "GEO:GSM2339611" }, { "identifier": "GTRD:EXP044480" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0540.1", "bed_filename": "macs/DAMO/EXP044480.Whole_worms_mixed-stage_embryos.DPY-27/EXP044480.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044480.Whole_worms_mixed-stage_embryos.DPY-27/EXP044480.Whole_worms_mixed-stage_embryos.DPY-27.MA0540.1.damo.fa", "profile_name": "dpy-27", "synonyms": [ "CELE_R13G10.1", "Chromosome condensation protein dpy-27" ] } ] } ] }