Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=10116&summary=true
{ "count": 41, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=3&q=&species=10116&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&q=&species=10116&summary=true", "results": [ { "folder": "EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL", "tf_name": "MLXIPL", "samples": [ { "cell": { "title": "INS-1E (pancreatic beta-cells)" }, "biological_condition": "2h glucose" } ], "references": [ { "identifier": "GEO:GSE81628" }, { "identifier": "GEO:GSM2159991" }, { "identifier": "GEO:GSM2159992" }, { "identifier": "PUBMED:27545881" }, { "identifier": "GTRD:EXP036429" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0664.1", "bed_filename": "macs/DAMO/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.fa", "profile_name": "MLXIPL", "synonyms": [ "CHREBP", "MIO", "MLX", "MLX interacting protein like", "MONDOB", "Mlx interactor", "WBSCR14", "WS basic-helix-loop-helix leucine zipper protein", "WS-bHLH", "Williams Beuren syndrome chromosome region 14", "Williams-Beuren syndrome chromosome region 14 protein 1", "Williams-Beuren syndrome chromosome region 14 protein 2", "Williams-Beuren syndrome chromosome region 14 protein 3", "bHLHd14", "carbohydrate response element binding protein", "carbohydrate-responsive element-binding protein", "class D basic helix-loop-helix protein 14", "williams-Beuren syndrome chromosomal region 14 protein" ] } ] }, { "folder": "EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL", "tf_name": "MLXIPL", "samples": [ { "cell": { "title": "INS-1E (pancreatic beta-cells)" }, "biological_condition": "12h glucose" } ], "references": [ { "identifier": "GEO:GSM2159993" }, { "identifier": "PUBMED:27545881" }, { "identifier": "GEO:GSE81628" }, { "identifier": "GEO:GSM2159994" }, { "identifier": "GTRD:EXP036430" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0664.1", "bed_filename": "macs/DAMO/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.fa", "profile_name": "MLXIPL", "synonyms": [ "CHREBP", "MIO", "MLX", "MLX interacting protein like", "MONDOB", "Mlx interactor", "WBSCR14", "WS basic-helix-loop-helix leucine zipper protein", "WS-bHLH", "Williams Beuren syndrome chromosome region 14", "Williams-Beuren syndrome chromosome region 14 protein 1", "Williams-Beuren syndrome chromosome region 14 protein 2", "Williams-Beuren syndrome chromosome region 14 protein 3", "bHLHd14", "carbohydrate response element binding protein", "carbohydrate-responsive element-binding protein", "class D basic helix-loop-helix protein 14", "williams-Beuren syndrome chromosomal region 14 protein" ] } ] }, { "folder": "EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL", "tf_name": "MLXIPL", "samples": [ { "cell": { "title": "INS-1E (pancreatic beta-cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE81628" }, { "identifier": "PUBMED:27545881" }, { "identifier": "GEO:GSM2159989" }, { "identifier": "GEO:GSM2159990" }, { "identifier": "GTRD:EXP036428" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0664.1", "bed_filename": "macs/DAMO/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.fa", "profile_name": "MLXIPL", "synonyms": [ "CHREBP", "MIO", "MLX", "MLX interacting protein like", "MONDOB", "Mlx interactor", "WBSCR14", "WS basic-helix-loop-helix leucine zipper protein", "WS-bHLH", "Williams Beuren syndrome chromosome region 14", "Williams-Beuren syndrome chromosome region 14 protein 1", "Williams-Beuren syndrome chromosome region 14 protein 2", "Williams-Beuren syndrome chromosome region 14 protein 3", "bHLHd14", "carbohydrate response element binding protein", "carbohydrate-responsive element-binding protein", "class D basic helix-loop-helix protein 14", "williams-Beuren syndrome chromosomal region 14 protein" ] } ] }, { "folder": "EXP037929.liver.NR1H4", "tf_name": "NR1H4", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "sham surgery, 14 days after surgery" } ], "references": [ { "identifier": "GEO:GSM2339398" }, { "identifier": "GEO:GSE87730" }, { "identifier": "PUBMED:28440344" }, { "identifier": "GTRD:EXP037929" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA1110.1", "bed_filename": "macs/DAMO/EXP037929.liver.NR1H4/EXP037929.liver.NR1H4.MA1110.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037929.liver.NR1H4/EXP037929.liver.NR1H4.MA1110.1.damo.fa", "profile_name": "NR1H4", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "PFIC5", "RIP14", "RXR-interacting protein 14", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "retinoid X receptor-interacting protein 14" ] }, { "jaspar_id": "MA1146.1", "bed_filename": "macs/DAMO/EXP037929.liver.NR1H4/EXP037929.liver.NR1H4.MA1146.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037929.liver.NR1H4/EXP037929.liver.NR1H4.MA1146.1.damo.fa", "profile_name": "NR1H4::RXRA", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "NR2B1", "PFIC5", "RIP14", "RXR-alpha", "RXR-interacting protein 14", "RXRalpha", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "nuclear receptor subfamily 2 group B member 1", "retinoic acid receptor RXR-alpha", "retinoid X nuclear receptor alpha", "retinoid X receptor alpha", "retinoid X receptor-interacting protein 14" ] } ] }, { "folder": "EXP037930.liver.NR1H4", "tf_name": "NR1H4", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "ligated bile duct, 14 days after surgery" } ], "references": [ { "identifier": "GEO:GSM2339399" }, { "identifier": "GEO:GSE87730" }, { "identifier": "PUBMED:28440344" }, { "identifier": "GTRD:EXP037930" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA1110.1", "bed_filename": "macs/DAMO/EXP037930.liver.NR1H4/EXP037930.liver.NR1H4.MA1110.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037930.liver.NR1H4/EXP037930.liver.NR1H4.MA1110.1.damo.fa", "profile_name": "NR1H4", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "PFIC5", "RIP14", "RXR-interacting protein 14", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "retinoid X receptor-interacting protein 14" ] }, { "jaspar_id": "MA1146.1", "bed_filename": "macs/DAMO/EXP037930.liver.NR1H4/EXP037930.liver.NR1H4.MA1146.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037930.liver.NR1H4/EXP037930.liver.NR1H4.MA1146.1.damo.fa", "profile_name": "NR1H4::RXRA", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "NR2B1", "PFIC5", "RIP14", "RXR-alpha", "RXR-interacting protein 14", "RXRalpha", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "nuclear receptor subfamily 2 group B member 1", "retinoic acid receptor RXR-alpha", "retinoid X nuclear receptor alpha", "retinoid X receptor alpha", "retinoid X receptor-interacting protein 14" ] } ] }, { "folder": "EXP037931.liver.NR1H4", "tf_name": "NR1H4", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "sham surgery, 5 days after surgery" } ], "references": [ { "identifier": "PUBMED:28440344" }, { "identifier": "GEO:GSM2339400" }, { "identifier": "GEO:GSE87730" }, { "identifier": "GTRD:EXP037931" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA1110.1", "bed_filename": "macs/DAMO/EXP037931.liver.NR1H4/EXP037931.liver.NR1H4.MA1110.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037931.liver.NR1H4/EXP037931.liver.NR1H4.MA1110.1.damo.fa", "profile_name": "NR1H4", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "PFIC5", "RIP14", "RXR-interacting protein 14", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "retinoid X receptor-interacting protein 14" ] }, { "jaspar_id": "MA1146.1", "bed_filename": "macs/DAMO/EXP037931.liver.NR1H4/EXP037931.liver.NR1H4.MA1146.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037931.liver.NR1H4/EXP037931.liver.NR1H4.MA1146.1.damo.fa", "profile_name": "NR1H4::RXRA", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "NR2B1", "PFIC5", "RIP14", "RXR-alpha", "RXR-interacting protein 14", "RXRalpha", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "nuclear receptor subfamily 2 group B member 1", "retinoic acid receptor RXR-alpha", "retinoid X nuclear receptor alpha", "retinoid X receptor alpha", "retinoid X receptor-interacting protein 14" ] } ] }, { "folder": "EXP037932.liver.NR1H4", "tf_name": "NR1H4", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "ligated bile duct, 5 days after surgery" } ], "references": [ { "identifier": "GEO:GSE87730" }, { "identifier": "GEO:GSM2339401" }, { "identifier": "PUBMED:28440344" }, { "identifier": "GTRD:EXP037932" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA1110.1", "bed_filename": "macs/DAMO/EXP037932.liver.NR1H4/EXP037932.liver.NR1H4.MA1110.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037932.liver.NR1H4/EXP037932.liver.NR1H4.MA1110.1.damo.fa", "profile_name": "NR1H4", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "PFIC5", "RIP14", "RXR-interacting protein 14", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "retinoid X receptor-interacting protein 14" ] }, { "jaspar_id": "MA1146.1", "bed_filename": "macs/DAMO/EXP037932.liver.NR1H4/EXP037932.liver.NR1H4.MA1146.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037932.liver.NR1H4/EXP037932.liver.NR1H4.MA1146.1.damo.fa", "profile_name": "NR1H4::RXRA", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "NR2B1", "PFIC5", "RIP14", "RXR-alpha", "RXR-interacting protein 14", "RXRalpha", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "nuclear receptor subfamily 2 group B member 1", "retinoic acid receptor RXR-alpha", "retinoid X nuclear receptor alpha", "retinoid X receptor alpha", "retinoid X receptor-interacting protein 14" ] } ] }, { "folder": "EXP037933.liver.NR1H4", "tf_name": "NR1H4", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "sham surgery, 1 day after surgery" } ], "references": [ { "identifier": "GEO:GSM2339402" }, { "identifier": "PUBMED:28440344" }, { "identifier": "GEO:GSE87730" }, { "identifier": "GTRD:EXP037933" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA1110.1", "bed_filename": "macs/DAMO/EXP037933.liver.NR1H4/EXP037933.liver.NR1H4.MA1110.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037933.liver.NR1H4/EXP037933.liver.NR1H4.MA1110.1.damo.fa", "profile_name": "NR1H4", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "PFIC5", "RIP14", "RXR-interacting protein 14", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "retinoid X receptor-interacting protein 14" ] }, { "jaspar_id": "MA1146.1", "bed_filename": "macs/DAMO/EXP037933.liver.NR1H4/EXP037933.liver.NR1H4.MA1146.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037933.liver.NR1H4/EXP037933.liver.NR1H4.MA1146.1.damo.fa", "profile_name": "NR1H4::RXRA", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "NR2B1", "PFIC5", "RIP14", "RXR-alpha", "RXR-interacting protein 14", "RXRalpha", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "nuclear receptor subfamily 2 group B member 1", "retinoic acid receptor RXR-alpha", "retinoid X nuclear receptor alpha", "retinoid X receptor alpha", "retinoid X receptor-interacting protein 14" ] } ] }, { "folder": "EXP037934.liver.NR1H4", "tf_name": "NR1H4", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "ligated bile duct, 1 day after surgery" } ], "references": [ { "identifier": "PUBMED:28440344" }, { "identifier": "GEO:GSM2339403" }, { "identifier": "GEO:GSE87730" }, { "identifier": "GTRD:EXP037934" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA1110.1", "bed_filename": "macs/DAMO/EXP037934.liver.NR1H4/EXP037934.liver.NR1H4.MA1110.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037934.liver.NR1H4/EXP037934.liver.NR1H4.MA1110.1.damo.fa", "profile_name": "NR1H4", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "PFIC5", "RIP14", "RXR-interacting protein 14", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "retinoid X receptor-interacting protein 14" ] }, { "jaspar_id": "MA1146.1", "bed_filename": "macs/DAMO/EXP037934.liver.NR1H4/EXP037934.liver.NR1H4.MA1146.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037934.liver.NR1H4/EXP037934.liver.NR1H4.MA1146.1.damo.fa", "profile_name": "NR1H4::RXRA", "synonyms": [ "BAR", "FXR", "HRR-1", "HRR1", "NR2B1", "PFIC5", "RIP14", "RXR-alpha", "RXR-interacting protein 14", "RXRalpha", "bile acid receptor", "farnesoid X nuclear receptor", "farnesoid X-activated receptor", "farnesol receptor HRR-1", "nuclear receptor subfamily 1 group H member 4", "nuclear receptor subfamily 2 group B member 1", "retinoic acid receptor RXR-alpha", "retinoid X nuclear receptor alpha", "retinoid X receptor alpha", "retinoid X receptor-interacting protein 14" ] } ] }, { "folder": "EXP036524.oligodendrocytes.OLIG2", "tf_name": "OLIG2", "samples": [ { "cell": { "title": "oligodendrocytes" }, "biological_condition": "LPC (12.5 mM) for 6h" } ], "references": [ { "identifier": "PUBMED:27733608" }, { "identifier": "GEO:GSM2225637" }, { "identifier": "GEO:GSE84011" }, { "identifier": "GTRD:EXP036524" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0678.1", "bed_filename": "macs/DAMO/EXP036524.oligodendrocytes.OLIG2/EXP036524.oligodendrocytes.OLIG2.MA0678.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036524.oligodendrocytes.OLIG2/EXP036524.oligodendrocytes.OLIG2.MA0678.1.damo.fa", "profile_name": "OLIG2", "synonyms": [ "BHLHB1", "OLIGO2", "PRKCBP2", "RACK17", "bHLHe19", "basic domain, helix-loop-helix protein, class B, 1", "class B basic helix-loop-helix protein 1", "class E basic helix-loop-helix protein 19", "human protein kinase C-binding protein RACK17", "oligodendrocyte lineage transcription factor 2", "oligodendrocyte transcription factor 2", "oligodendrocyte-specific bHLH transcription factor 2", "protein kinase C-binding protein 2" ] } ] } ] }