Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json
, jsonp
, yaml
,
bed
, and also api
for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&order=-species&q=CTCF&summary=true
https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&order=-species&page=2&q=CTCF&summary=true", "previous": null, "results": [ { "folder": "ENCSR000AHD.MCF7_Invasive_ductal_breast_carcinoma.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "MCF7 (Invasive ductal breast carcinoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AHD" }, { "identifier": "GTRD:EXP011096" }, { "identifier": "GTRD:EXP011188" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000AHD.MCF7_Invasive_ductal_breast_carcinoma.CTCF/ENCSR000AHD.MCF7_Invasive_ductal_breast_carcinoma.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000AHD.MCF7_Invasive_ductal_breast_carcinoma.CTCF/ENCSR000AHD.MCF7_Invasive_ductal_breast_carcinoma.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000AKB.GM12878_female_B-cells_lymphoblastoid_cell_line.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "GM12878 (female B-cells lymphoblastoid cell line)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AKB" }, { "identifier": "GTRD:EXP011225" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000AKB.GM12878_female_B-cells_lymphoblastoid_cell_line.CTCF/ENCSR000AKB.GM12878_female_B-cells_lymphoblastoid_cell_line.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000AKB.GM12878_female_B-cells_lymphoblastoid_cell_line.CTCF/ENCSR000AKB.GM12878_female_B-cells_lymphoblastoid_cell_line.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000AKO.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AKO" }, { "identifier": "GTRD:EXP011041" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000AKO.K562_myelogenous_leukemia.CTCF/ENCSR000AKO.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000AKO.K562_myelogenous_leukemia.CTCF/ENCSR000AKO.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000ALA.HUVEC-C_HUVEC_umbilical_vein_endothelial_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "HUVEC-C (HUVEC, umbilical vein endothelial cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000ALA" }, { "identifier": "GTRD:EXP010343" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000ALA.HUVEC-C_HUVEC_umbilical_vein_endothelial_cells.CTCF/ENCSR000ALA.HUVEC-C_HUVEC_umbilical_vein_endothelial_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000ALA.HUVEC-C_HUVEC_umbilical_vein_endothelial_cells.CTCF/ENCSR000ALA.HUVEC-C_HUVEC_umbilical_vein_endothelial_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000ALJ.keratinocytes.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "keratinocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000ALJ" }, { "identifier": "GTRD:EXP010426" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000ALJ.keratinocytes.CTCF/ENCSR000ALJ.keratinocytes.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000ALJ.keratinocytes.CTCF/ENCSR000ALJ.keratinocytes.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000ALV.mammary_epithelial_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "mammary epithelial cells" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000ALV" }, { "identifier": "GTRD:EXP010414" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000ALV.mammary_epithelial_cells.CTCF/ENCSR000ALV.mammary_epithelial_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000ALV.mammary_epithelial_cells.CTCF/ENCSR000ALV.mammary_epithelial_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000AMA.HepG2_hepatoblastoma.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "HepG2 (hepatoblastoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AMA" }, { "identifier": "GTRD:EXP010952" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000AMA.HepG2_hepatoblastoma.CTCF/ENCSR000AMA.HepG2_hepatoblastoma.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000AMA.HepG2_hepatoblastoma.CTCF/ENCSR000AMA.HepG2_hepatoblastoma.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000AMF.WA01_H1_human_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "WA01 (H1, human embryonic stem cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AMF" }, { "identifier": "GTRD:EXP010420" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000AMF.WA01_H1_human_embryonic_stem_cells.CTCF/ENCSR000AMF.WA01_H1_human_embryonic_stem_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000AMF.WA01_H1_human_embryonic_stem_cells.CTCF/ENCSR000AMF.WA01_H1_human_embryonic_stem_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000ANE.skeletal_muscles_and_myoblasts.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "skeletal muscles and myoblasts" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000ANE" }, { "identifier": "GTRD:EXP010268" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000ANE.skeletal_muscles_and_myoblasts.CTCF/ENCSR000ANE.skeletal_muscles_and_myoblasts.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000ANE.skeletal_muscles_and_myoblasts.CTCF/ENCSR000ANE.skeletal_muscles_and_myoblasts.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000ANO.normal_lung_fibroblasts.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "normal lung fibroblasts" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000ANO" }, { "identifier": "GTRD:EXP010107" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000ANO.normal_lung_fibroblasts.CTCF/ENCSR000ANO.normal_lung_fibroblasts.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000ANO.normal_lung_fibroblasts.CTCF/ENCSR000ANO.normal_lung_fibroblasts.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] } ] }{ "count": 977, "next": "