Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&order=-samples&page=97&q=CTCF&summary=true
{ "count": 977, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&order=-samples&page=98&q=CTCF&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&order=-samples&page=96&q=CTCF&summary=true", "results": [ { "folder": "GSE70764.MCF7_Invasive_ductal_breast_carcinoma.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "MCF7 (Invasive ductal breast carcinoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE70764" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE70764.MCF7_Invasive_ductal_breast_carcinoma.CTCF/GSE70764.MCF7_Invasive_ductal_breast_carcinoma.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE70764.MCF7_Invasive_ductal_breast_carcinoma.CTCF/GSE70764.MCF7_Invasive_ductal_breast_carcinoma.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE70764.OVCAR8_high_grade_ovarian_serous_adenocarcinoma.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "OVCAR8 (high grade ovarian serous adenocarcinoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE70764" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE70764.OVCAR8_high_grade_ovarian_serous_adenocarcinoma.CTCF/GSE70764.OVCAR8_high_grade_ovarian_serous_adenocarcinoma.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE70764.OVCAR8_high_grade_ovarian_serous_adenocarcinoma.CTCF/GSE70764.OVCAR8_high_grade_ovarian_serous_adenocarcinoma.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE76815.SK-N-SH_neuroblastoma.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "SK-N-SH (neuroblastoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE76815" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE76815.SK-N-SH_neuroblastoma.CTCF/GSE76815.SK-N-SH_neuroblastoma.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE76815.SK-N-SH_neuroblastoma.CTCF/GSE76815.SK-N-SH_neuroblastoma.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE78113.MCF7_Invasive_ductal_breast_carcinoma_HYPOXIA.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "MCF7 (Invasive ductal breast carcinoma)" }, "biological_condition": "HYPOXIA" } ], "references": [ { "identifier": "GEO:GSE78113" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_HYPOXIA.CTCF/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_HYPOXIA.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_HYPOXIA.CTCF/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_HYPOXIA.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE78113.MCF7_Invasive_ductal_breast_carcinoma_NORMOXIA.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "MCF7 (Invasive ductal breast carcinoma)" }, "biological_condition": "NORMOXIA" } ], "references": [ { "identifier": "GEO:GSE78113" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_NORMOXIA.CTCF/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_NORMOXIA.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_NORMOXIA.CTCF/GSE78113.MCF7_Invasive_ductal_breast_carcinoma_NORMOXIA.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE78113.RCC_7860_Renal_cell_carcinoma.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "RCC 7860 (Renal cell carcinoma)" }, "biological_condition": "NORMOXIA" } ], "references": [ { "identifier": "GEO:GSE78113" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE78113.RCC_7860_Renal_cell_carcinoma.CTCF/GSE78113.RCC_7860_Renal_cell_carcinoma.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE78113.RCC_7860_Renal_cell_carcinoma.CTCF/GSE78113.RCC_7860_Renal_cell_carcinoma.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE84432.VCaP_prostate_carcinoma_ETOH.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "VCaP (prostate carcinoma)" }, "biological_condition": "ETOH" } ], "references": [ { "identifier": "GEO:GSE84432" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE84432.VCaP_prostate_carcinoma_ETOH.CTCF/GSE84432.VCaP_prostate_carcinoma_ETOH.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE84432.VCaP_prostate_carcinoma_ETOH.CTCF/GSE84432.VCaP_prostate_carcinoma_ETOH.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "GSE84432.VCaP_prostate_carcinoma_R1881.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "VCaP (prostate carcinoma)" }, "biological_condition": "R1881" } ], "references": [ { "identifier": "GEO:GSE84432" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/GSE84432.VCaP_prostate_carcinoma_R1881.CTCF/GSE84432.VCaP_prostate_carcinoma_R1881.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/GSE84432.VCaP_prostate_carcinoma_R1881.CTCF/GSE84432.VCaP_prostate_carcinoma_R1881.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000BNK.K562_myelogenous_leukemia.CTCFL", "tf_name": "CTCFL", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000BNK" }, { "identifier": "GTRD:EXP010253" }, { "identifier": "GTRD:EXP010167" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA1102.2", "bed_filename": "macs/DAMO/ENCSR000BNK.K562_myelogenous_leukemia.CTCFL/ENCSR000BNK.K562_myelogenous_leukemia.CTCFL.MA1102.2.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000BNK.K562_myelogenous_leukemia.CTCFL/ENCSR000BNK.K562_myelogenous_leukemia.CTCFL.MA1102.2.damo.fa", "profile_name": "CTCFL", "synonyms": [ "BORIS", "BORIS-like protein", "CCCTC-binding factor like", "CT27", "CTCF-T", "HMGB1L1", "brother of the regulator of imprinted sites", "cancer/testis antigen 27", "dJ579F20.2", "transcriptional repressor CTCFL" ] } ] }, { "folder": "EXP030719.embryonic_stem_cells.CTCFL", "tf_name": "CTCFL", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM841710" }, { "identifier": "GEO:GSE34094" }, { "identifier": "PUBMED:22709888" }, { "identifier": "GTRD:EXP030719" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1102.2", "bed_filename": "macs/DAMO/EXP030719.embryonic_stem_cells.CTCFL/EXP030719.embryonic_stem_cells.CTCFL.MA1102.2.damo.bed", "fasta_filename": "macs/DAMO/EXP030719.embryonic_stem_cells.CTCFL/EXP030719.embryonic_stem_cells.CTCFL.MA1102.2.damo.fa", "profile_name": "CTCFL", "synonyms": [ "BORIS", "BORIS-like protein", "CCCTC-binding factor like", "CT27", "CTCF-T", "HMGB1L1", "brother of the regulator of imprinted sites", "cancer/testis antigen 27", "dJ579F20.2", "transcriptional repressor CTCFL" ] } ] } ] }