Detailed information of SOX2

TF summary

TF Name: SOX2 Cell-type/Tissue: GLIOMA
Condition/Source: stem JASPAR ID: MA0143.3
Data source: GEO Identifier: GSE67282

External links

         

Statistical details

Model Peak caller Model detail Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0143.3 171 1464 99.7528 -7.7859187296728
PWM MACS MA0143.3 177 1784 88.7 -17.004469809933
DNAshaped MACS 4bits MA0143.3 177 1749 0.99873 -16.426752992466
DNAshaped MACS PSSM MA0143.3 177 1709 0.99909 -15.020990539094
DNAshaped MACS TFFM MA0143.3 149 1257 0.99578 -5.6471932347154
TFFM MACS MA0143.3 167 1411 0.66088 -6.9003682499602

13 datasets found for the same TF (SOX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Data source Identifier JASPAR ID
SOX2 ESC GEO GSE18292 MA0143.3
SOX2 BJ induced GEO GSE36570 MA0143.3
SOX2 ESC h9 GEO GSE46837 MA0143.3
SOX2 HCC95 GEO GSE46837 MA0143.3
SOX2 KYSE70 GEO GSE46837 MA0143.3
SOX2 TT GEO GSE46837 MA0143.3
SOX2 RENVM GEO GSE49404 MA0143.3
SOX2 RENVM shsox2 GEO GSE49404 MA0143.3
SOX2 IPSC GEO GSE56567 MA0143.3
SOX2 IPSC inhi GEO GSE67282 MA0143.3
SOX2 IPSC kdp53 inhi GEO GSE67282 MA0143.3
SOX2 ESC GEO GSE69479 MA0143.3
SOX2 HNSC GEO GSE69479 MA0143.3