Detailed information of SOX2

TF summary

TF Name: SOX2 Cell-type/Tissue: IPSC
Condition/Source: JASPAR ID: MA0143.3
Data source: GEO Identifier: GSE56567

External links

         

Statistical details

Model Peak caller Model detail Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0143.3 149 18751 99.3419 -2.1822017779919
PWM MACS MA0143.3 167 23694 86.1 -7.3244349230872
DNAshaped MACS 4bits MA0143.3 167 21791 0.99801 -4.7392400363509
DNAshaped MACS PSSM MA0143.3 167 23432 0.9947 -7.4047241037659
DNAshaped MACS TFFM MA0143.3 127 16601 0.98216 -2.1283769669151
TFFM MACS MA0143.3 127 15244 0.59685 -0.4326926976583

13 datasets found for the same TF (SOX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Data source Identifier JASPAR ID
SOX2 ESC GEO GSE18292 MA0143.3
SOX2 BJ induced GEO GSE36570 MA0143.3
SOX2 ESC h9 GEO GSE46837 MA0143.3
SOX2 HCC95 GEO GSE46837 MA0143.3
SOX2 KYSE70 GEO GSE46837 MA0143.3
SOX2 TT GEO GSE46837 MA0143.3
SOX2 RENVM GEO GSE49404 MA0143.3
SOX2 RENVM shsox2 GEO GSE49404 MA0143.3
SOX2 GLIOMA stem GEO GSE67282 MA0143.3
SOX2 IPSC inhi GEO GSE67282 MA0143.3
SOX2 IPSC kdp53 inhi GEO GSE67282 MA0143.3
SOX2 ESC GEO GSE69479 MA0143.3
SOX2 HNSC GEO GSE69479 MA0143.3