Detailed information of SOX2

TF summary

TF Name: SOX2 Cell-type/Tissue: RENVM
Condition/Source: shsox2 JASPAR ID: MA0143.3
Data source: GEO Identifier: GSE49404

External links


Statistical details

Model Peak caller Model detail Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0143.3 85 811 99.3309 -0.4184356824255
PWM MACS MA0143.3 117 1102 90.7 -1.8506689345388
DNAshaped MACS 4bits MA0143.3 91 838 0.99881 -0.3898208356870
DNAshaped MACS PSSM MA0143.3 91 878 0.9983 -0.9311328798818
DNAshaped MACS TFFM MA0143.3 63 554 0.99545 -7.7871978324201
TFFM MACS MA0143.3 63 72 0.50482 1

13 datasets found for the same TF (SOX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Data source Identifier JASPAR ID
SOX2 ESC GEO GSE18292 MA0143.3
SOX2 BJ induced GEO GSE36570 MA0143.3
SOX2 ESC h9 GEO GSE46837 MA0143.3
SOX2 HCC95 GEO GSE46837 MA0143.3
SOX2 KYSE70 GEO GSE46837 MA0143.3
SOX2 TT GEO GSE46837 MA0143.3
SOX2 RENVM GEO GSE49404 MA0143.3
SOX2 IPSC GEO GSE56567 MA0143.3
SOX2 GLIOMA stem GEO GSE67282 MA0143.3
SOX2 IPSC inhi GEO GSE67282 MA0143.3
SOX2 IPSC kdp53 inhi GEO GSE67282 MA0143.3
SOX2 ESC GEO GSE69479 MA0143.3
SOX2 HNSC GEO GSE69479 MA0143.3