Detailed information of SOX2

TF summary

TF Name: SOX2 Cell-type/Tissue: TT
Condition/Source: JASPAR ID: MA0143.3
Data source: GEO Identifier: GSE46837

External links


Statistical details

Model Peak caller Model detail Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0143.3 139 3562 99.3524 -9.6703904081466
PWM MACS MA0143.3 169 4183 90.1 -11.894294229761
DNAshaped MACS 4bits MA0143.3 153 4050 0.99735 -13.977010102714
DNAshaped MACS PSSM MA0143.3 153 3873 0.99761 -11.699127782212
DNAshaped MACS TFFM MA0143.3 171 3459 0.98841 -4.4040884515443
TFFM MACS MA0143.3 171 3506 0.74757 -4.3109089504534

13 datasets found for the same TF (SOX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Data source Identifier JASPAR ID
SOX2 ESC GEO GSE18292 MA0143.3
SOX2 BJ induced GEO GSE36570 MA0143.3
SOX2 ESC h9 GEO GSE46837 MA0143.3
SOX2 HCC95 GEO GSE46837 MA0143.3
SOX2 KYSE70 GEO GSE46837 MA0143.3
SOX2 RENVM GEO GSE49404 MA0143.3
SOX2 RENVM shsox2 GEO GSE49404 MA0143.3
SOX2 IPSC GEO GSE56567 MA0143.3
SOX2 GLIOMA stem GEO GSE67282 MA0143.3
SOX2 IPSC inhi GEO GSE67282 MA0143.3
SOX2 IPSC kdp53 inhi GEO GSE67282 MA0143.3
SOX2 ESC GEO GSE69479 MA0143.3
SOX2 HNSC GEO GSE69479 MA0143.3