Detailed information of SOX2

TF summary

TF Name: SOX2 Cell-type/Tissue: KYSE70
Condition/Source: JASPAR ID: MA0143.3
Data source: GEO Identifier: GSE46837

External links

         

Statistical details

Model Peak caller Model detail Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0143.3 167 2493 99.7527 -6.8669027130967
PWM MACS MA0143.3 187 3201 86.4 -16.040521054056
DNAshaped MACS 4bits MA0143.3 187 2991 0.99763 -13.150886926715
DNAshaped MACS PSSM MA0143.3 187 2935 0.99777 -12.116008014737
DNAshaped MACS TFFM MA0143.3 151 2380 0.99063 -8.2222687561306
TFFM MACS MA0143.3 151 2245 0.7152 -5.3531133746253

13 datasets found for the same TF (SOX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Data source Identifier JASPAR ID
SOX2 ESC GEO GSE18292 MA0143.3
SOX2 BJ induced GEO GSE36570 MA0143.3
SOX2 ESC h9 GEO GSE46837 MA0143.3
SOX2 HCC95 GEO GSE46837 MA0143.3
SOX2 TT GEO GSE46837 MA0143.3
SOX2 RENVM GEO GSE49404 MA0143.3
SOX2 RENVM shsox2 GEO GSE49404 MA0143.3
SOX2 IPSC GEO GSE56567 MA0143.3
SOX2 GLIOMA stem GEO GSE67282 MA0143.3
SOX2 IPSC inhi GEO GSE67282 MA0143.3
SOX2 IPSC kdp53 inhi GEO GSE67282 MA0143.3
SOX2 ESC GEO GSE69479 MA0143.3
SOX2 HNSC GEO GSE69479 MA0143.3