Detailed information of SOX2

TF summary

TF Name: SOX2 Cell-type/Tissue: ESC
Condition/Source: h9 JASPAR ID: MA0143.3
Data source: GEO Identifier: GSE46837

External links


Statistical details

Model Peak caller Model detail Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0143.3 169 1470 99.7528 -18.043665603860
PWM MACS MA0143.3 165 1751 90.9 -33.040264609988
DNAshaped MACS 4bits MA0143.3 171 1722 0.99915 -31.421532942861
DNAshaped MACS PSSM MA0143.3 171 1720 0.99912 -31.310959256755
DNAshaped MACS TFFM MA0143.3 195 1551 0.99841 -17.592083731741
TFFM MACS MA0143.3 195 1245 0.90257 -5.44656047097

13 datasets found for the same TF (SOX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Data source Identifier JASPAR ID
SOX2 ESC GEO GSE18292 MA0143.3
SOX2 BJ induced GEO GSE36570 MA0143.3
SOX2 HCC95 GEO GSE46837 MA0143.3
SOX2 KYSE70 GEO GSE46837 MA0143.3
SOX2 TT GEO GSE46837 MA0143.3
SOX2 RENVM GEO GSE49404 MA0143.3
SOX2 RENVM shsox2 GEO GSE49404 MA0143.3
SOX2 IPSC GEO GSE56567 MA0143.3
SOX2 GLIOMA stem GEO GSE67282 MA0143.3
SOX2 IPSC inhi GEO GSE67282 MA0143.3
SOX2 IPSC kdp53 inhi GEO GSE67282 MA0143.3
SOX2 ESC GEO GSE69479 MA0143.3
SOX2 HNSC GEO GSE69479 MA0143.3