Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&q=&species=3702&summary=true
{ "count": 78, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=2&q=&species=3702&summary=true", "previous": null, "results": [ { "folder": { "folder": "EXP041202.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence meristems and floral buds (5-7 weeks)" }, "biological_condition": "wild type" } ], "references": [ { "identifier": "PUBMED:19385720" }, { "identifier": "GEO:GSE14600" }, { "identifier": "GEO:GSM364939" }, { "identifier": "GTRD:EXP041202" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041202.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041202.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041202.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041202.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041203.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence meristems and floral buds (5-7 weeks)" }, "biological_condition": "wild type" } ], "references": [ { "identifier": "GEO:GSE14600" }, { "identifier": "GEO:GSM364940" }, { "identifier": "PUBMED:19385720" }, { "identifier": "GTRD:EXP041203" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041203.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041203.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041203.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041203.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041205.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence meristems and floral buds (5-7 weeks)" }, "biological_condition": "wild type" } ], "references": [ { "identifier": "GEO:GSE14600" }, { "identifier": "PUBMED:19385720" }, { "identifier": "GEO:GSM364942" }, { "identifier": "GTRD:EXP041205" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041205.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041205.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041205.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041205.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041206.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence meristems and floral buds (5-7 weeks)" }, "biological_condition": "agamous mutant (ag-1)" } ], "references": [ { "identifier": "GEO:GSE14600" }, { "identifier": "PUBMED:19385720" }, { "identifier": "GEO:GSM364943" }, { "identifier": "GTRD:EXP041206" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041206.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041206.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041206.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3/EXP041206.inflorescence_meristems_and_floral_buds_5-7_weeks.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041210.apical_meristems.AP1", "tf_name": "AP1", "samples": [ { "cell": { "title": "apical meristems" }, "biological_condition": "single treatment of 1 uM DEX to the shoot apex (2 hours)" } ], "references": [ { "identifier": "GEO:GSE20176" }, { "identifier": "PUBMED:20360106" }, { "identifier": "GEO:GSM506208" }, { "identifier": "GTRD:EXP041210" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0940.1", "bed_filename": "macs/DAMO/EXP041210.apical_meristems.AP1/EXP041210.apical_meristems.AP1.MA0940.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041210.apical_meristems.AP1/EXP041210.apical_meristems.AP1.MA0940.1.damo.fa", "profile_name": "AP1", "synonyms": [ "AGAMOUS-like 7", "AGL7", "APETALA1", "AT1G69120", "AtAP1", "F4N2.9", "F4N2_9", "FLORAL HOMEOTIC PROTEIN APETALA1", "K-box region and MADS-box transcription factor family protein" ] }, { "folder": { "folder": "EXP041211.apical_meristems.AP1", "tf_name": "AP1", "samples": [ { "cell": { "title": "apical meristems" }, "biological_condition": "single treatment of 1 uM DEX to the shoot apex (2 hours)" } ], "references": [ { "identifier": "GEO:GSM506209" }, { "identifier": "PUBMED:20360106" }, { "identifier": "GEO:GSE20176" }, { "identifier": "GTRD:EXP041211" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0940.1", "bed_filename": "macs/DAMO/EXP041211.apical_meristems.AP1/EXP041211.apical_meristems.AP1.MA0940.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041211.apical_meristems.AP1/EXP041211.apical_meristems.AP1.MA0940.1.damo.fa", "profile_name": "AP1", "synonyms": [ "AGAMOUS-like 7", "AGL7", "APETALA1", "AT1G69120", "AtAP1", "F4N2.9", "F4N2_9", "FLORAL HOMEOTIC PROTEIN APETALA1", "K-box region and MADS-box transcription factor family protein" ] }, { "folder": { "folder": "EXP041213.apical_meristems.AP1", "tf_name": "AP1", "samples": [ { "cell": { "title": "apical meristems" }, "biological_condition": "control" } ], "references": [ { "identifier": "GEO:GSE20176" }, { "identifier": "GEO:GSM506211" }, { "identifier": "PUBMED:20360106" }, { "identifier": "GTRD:EXP041213" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0940.1", "bed_filename": "macs/DAMO/EXP041213.apical_meristems.AP1/EXP041213.apical_meristems.AP1.MA0940.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041213.apical_meristems.AP1/EXP041213.apical_meristems.AP1.MA0940.1.damo.fa", "profile_name": "AP1", "synonyms": [ "AGAMOUS-like 7", "AGL7", "APETALA1", "AT1G69120", "AtAP1", "F4N2.9", "F4N2_9", "FLORAL HOMEOTIC PROTEIN APETALA1", "K-box region and MADS-box transcription factor family protein" ] }, { "folder": { "folder": "EXP041220.complete_15_day-old_seedlings.LFY", "tf_name": "LFY", "samples": [ { "cell": { "title": "complete 15 day-old seedlings" }, "biological_condition": "plants that overexpressed LFY (35S:LFY)" } ], "references": [ { "identifier": "GEO:GSM605656" }, { "identifier": "GEO:GSE24568" }, { "identifier": "PUBMED:21515819" }, { "identifier": "GTRD:EXP041220" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0590.1", "bed_filename": "macs/DAMO/EXP041220.complete_15_day-old_seedlings.LFY/EXP041220.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041220.complete_15_day-old_seedlings.LFY/EXP041220.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa", "profile_name": "LFY", "synonyms": [ "AT5G61850", "LEAFY", "LEAFY 3", "LFY3", "MAC9.13", "MAC9_13", "floral meristem identity control protein LEAFY (LFY)" ] }, { "folder": { "folder": "EXP041221.complete_15_day-old_seedlings.LFY", "tf_name": "LFY", "samples": [ { "cell": { "title": "complete 15 day-old seedlings" }, "biological_condition": "plants that overexpressed LFY (35S:LFY)" } ], "references": [ { "identifier": "PUBMED:21515819" }, { "identifier": "GEO:GSE24568" }, { "identifier": "GEO:GSM605657" }, { "identifier": "GTRD:EXP041221" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0590.1", "bed_filename": "macs/DAMO/EXP041221.complete_15_day-old_seedlings.LFY/EXP041221.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041221.complete_15_day-old_seedlings.LFY/EXP041221.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa", "profile_name": "LFY", "synonyms": [ "AT5G61850", "LEAFY", "LEAFY 3", "LFY3", "MAC9.13", "MAC9_13", "floral meristem identity control protein LEAFY (LFY)" ] }, { "folder": { "folder": "EXP041222.4_day_old_seedlings.FHY3", "tf_name": "FHY3", "samples": [ { "cell": { "title": "4 day old seedlings" }, "biological_condition": "Dark (35S:3FLAG-FHY3-3HA fhy3-4 transgenic line)" } ], "references": [ { "identifier": "GEO:GSM761689" }, { "identifier": "GEO:GSE30711" }, { "identifier": "PUBMED:21803941" }, { "identifier": "GTRD:EXP041222" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0557.1", "bed_filename": "macs/DAMO/EXP041222.4_day_old_seedlings.FHY3/EXP041222.4_day_old_seedlings.FHY3.MA0557.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041222.4_day_old_seedlings.FHY3/EXP041222.4_day_old_seedlings.FHY3.MA0557.1.damo.fa", "profile_name": "FHY3", "synonyms": [ "AT3G22170", "CHLOROPLAST DIVISION MUTANT 45", "CPD45", "far-red elongated hypocotyls 3" ] } ] }