Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&q=&species=10116&summary=true
{ "count": 73, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=2&q=&species=10116&summary=true", "previous": null, "results": [ { "folder": { "folder": "EXP031201.Schwann_cells.EGR2", "tf_name": "EGR2", "samples": [ { "cell": { "title": "Schwann cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM862399" }, { "identifier": "PUBMED:22492709" }, { "identifier": "GEO:GSE35132" }, { "identifier": "GEO:GSM862397" }, { "identifier": "GTRD:EXP031201" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0472.2", "bed_filename": "macs/DAMO/EXP031201.Schwann_cells.EGR2/EXP031201.Schwann_cells.EGR2.MA0472.2.damo.bed", "fasta_filename": "macs/DAMO/EXP031201.Schwann_cells.EGR2/EXP031201.Schwann_cells.EGR2.MA0472.2.damo.fa", "profile_name": "EGR2", "synonyms": [ "AT591", "CHN1", "CMT1D", "CMT4E", "E3 SUMO-protein ligase EGR2", "E3 SUMO-protein transferase ERG2", "KROX-20, Drosophila, homolog (early growth response-2)", "KROX20", "early growth response 2", "early growth response protein 2", "zinc finger protein Krox-20" ] }, { "folder": { "folder": "EXP031202.Schwann_cells.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "Schwann cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM862402" }, { "identifier": "PUBMED:22492709" }, { "identifier": "GEO:GSM862401" }, { "identifier": "GEO:GSE35132" }, { "identifier": "GEO:GSM862404" }, { "identifier": "GTRD:EXP031202" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP031202.Schwann_cells.SOX10/EXP031202.Schwann_cells.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP031202.Schwann_cells.SOX10/EXP031202.Schwann_cells.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] }, { "folder": { "folder": "EXP031707.oligodendrocytes.OLIG2", "tf_name": "OLIG2", "samples": [ { "cell": { "title": "oligodendrocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:22365546" }, { "identifier": "GEO:GSM995388" }, { "identifier": "GEO:GSE40506" }, { "identifier": "GTRD:EXP031707" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0678.1", "bed_filename": "macs/DAMO/EXP031707.oligodendrocytes.OLIG2/EXP031707.oligodendrocytes.OLIG2.MA0678.1.damo.bed", "fasta_filename": "macs/DAMO/EXP031707.oligodendrocytes.OLIG2/EXP031707.oligodendrocytes.OLIG2.MA0678.1.damo.fa", "profile_name": "OLIG2", "synonyms": [ "BHLHB1", "OLIGO2", "PRKCBP2", "RACK17", "bHLHe19", "basic domain, helix-loop-helix protein, class B, 1", "class B basic helix-loop-helix protein 1", "class E basic helix-loop-helix protein 19", "human protein kinase C-binding protein RACK17", "oligodendrocyte lineage transcription factor 2", "oligodendrocyte transcription factor 2", "oligodendrocyte-specific bHLH transcription factor 2", "protein kinase C-binding protein 2" ] }, { "folder": { "folder": "EXP032380.kidney.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "E20" } ], "references": [ { "identifier": "GEO:GSE50815" }, { "identifier": "GEO:GSM1230266" }, { "identifier": "GTRD:EXP032380" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0114.4", "bed_filename": "macs/DAMO/EXP032380.kidney.HNF4A/EXP032380.kidney.HNF4A.MA0114.4.damo.bed", "fasta_filename": "macs/DAMO/EXP032380.kidney.HNF4A/EXP032380.kidney.HNF4A.MA0114.4.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP032380.kidney.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "E20" } ], "references": [ { "identifier": "GEO:GSE50815" }, { "identifier": "GEO:GSM1230266" }, { "identifier": "GTRD:EXP032380" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA1494.1", "bed_filename": "macs/DAMO/EXP032380.kidney.HNF4A/EXP032380.kidney.HNF4A.MA1494.1.damo.bed", "fasta_filename": "macs/DAMO/EXP032380.kidney.HNF4A/EXP032380.kidney.HNF4A.MA1494.1.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP032381.kidney.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "P13" } ], "references": [ { "identifier": "GEO:GSE50815" }, { "identifier": "GEO:GSM1230268" }, { "identifier": "GTRD:EXP032381" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0114.4", "bed_filename": "macs/DAMO/EXP032381.kidney.HNF4A/EXP032381.kidney.HNF4A.MA0114.4.damo.bed", "fasta_filename": "macs/DAMO/EXP032381.kidney.HNF4A/EXP032381.kidney.HNF4A.MA0114.4.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP032381.kidney.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "P13" } ], "references": [ { "identifier": "GEO:GSE50815" }, { "identifier": "GEO:GSM1230268" }, { "identifier": "GTRD:EXP032381" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA1494.1", "bed_filename": "macs/DAMO/EXP032381.kidney.HNF4A/EXP032381.kidney.HNF4A.MA1494.1.damo.bed", "fasta_filename": "macs/DAMO/EXP032381.kidney.HNF4A/EXP032381.kidney.HNF4A.MA1494.1.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP032382.kidney.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "Adult" } ], "references": [ { "identifier": "GEO:GSM1230270" }, { "identifier": "GEO:GSE50815" }, { "identifier": "GTRD:EXP032382" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA1494.1", "bed_filename": "macs/DAMO/EXP032382.kidney.HNF4A/EXP032382.kidney.HNF4A.MA1494.1.damo.bed", "fasta_filename": "macs/DAMO/EXP032382.kidney.HNF4A/EXP032382.kidney.HNF4A.MA1494.1.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP033255.H4-II-E_hepatocellular_carcinoma.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:21901280" }, { "identifier": "GEO:GSM712669" }, { "identifier": "GEO:GSE28782" }, { "identifier": "GTRD:EXP033255" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP033255.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033255.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033255.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033255.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] }, { "folder": { "folder": "EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA - Scrambled" } ], "references": [ { "identifier": "GEO:GSE53862" }, { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302279" }, { "identifier": "GTRD:EXP033400" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0114.4", "bed_filename": "macs/DAMO/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A.MA0114.4.damo.bed", "fasta_filename": "macs/DAMO/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A.MA0114.4.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] } ] }