count: 6 next: null previous: null results: - datasets: - bed_filename: macs/DAMO/EXP041072.10_hpf_embryo_bud_stage.CDX4/EXP041072.10_hpf_embryo_bud_stage.CDX4.MA1473.1.damo.bed fasta_filename: macs/DAMO/EXP041072.10_hpf_embryo_bud_stage.CDX4/EXP041072.10_hpf_embryo_bud_stage.CDX4.MA1473.1.damo.fa jaspar_id: MA1473.1 profile_name: CDX4 synonyms: - caudal type homeobox 4 - caudal type homeobox transcription factor 4 - caudal-type homeobox protein 4 - homeobox protein CDX-4 folder: EXP041072.10_hpf_embryo_bud_stage.CDX4 references: - identifier: PUBMED:24286030 - identifier: GEO:GSE48254 - identifier: GEO:GSM1173379 - identifier: GTRD:EXP041072 samples: - biological_condition: '' cell: title: 10 hpf embryo (bud stage) species: name: Danio rerio tf_name: CDX4 - datasets: - bed_filename: macs/DAMO/EXP041020.10_hpf_embryo_bud_stage.CTCF/EXP041020.10_hpf_embryo_bud_stage.CTCF.MA0139.1.damo.bed fasta_filename: macs/DAMO/EXP041020.10_hpf_embryo_bud_stage.CTCF/EXP041020.10_hpf_embryo_bud_stage.CTCF.MA0139.1.damo.fa jaspar_id: MA0139.1 profile_name: CTCF synonyms: - 11 zinc finger transcriptional repressor - 11-zinc finger protein - CCCTC-binding factor - CCCTC-binding factor (zinc finger protein) - CFAP108 - CTCFL paralog - FAP108 - MRD21 - transcriptional repressor CTCF folder: EXP041020.10_hpf_embryo_bud_stage.CTCF references: - identifier: GEO:GSE84600 - identifier: PUBMED:29158440 - identifier: GEO:GSM2242561 - identifier: GEO:GSM2242562 - identifier: GTRD:EXP041020 samples: - biological_condition: '' cell: title: 10 hpf embryo (bud stage) species: name: Danio rerio tf_name: CTCF - datasets: - bed_filename: macs/DAMO/EXP041005.4_5_hpf_embryo.FOXH1/EXP041005.4_5_hpf_embryo.FOXH1.MA0479.1.damo.bed fasta_filename: macs/DAMO/EXP041005.4_5_hpf_embryo.FOXH1/EXP041005.4_5_hpf_embryo.FOXH1.MA0479.1.damo.fa jaspar_id: MA0479.1 profile_name: FOXH1 synonyms: - FAST-1 - FAST1 - TGF-beta/activin signal transducer - fast-2 - forkhead activin signal transducer 2 - forkhead activin signal transducer-1 - forkhead box H1 - forkhead box protein H1 - hFAST-1 folder: EXP041005.4_5_hpf_embryo.FOXH1 references: - identifier: GEO:GSE67648 - identifier: PUBMED:25869585 - identifier: GEO:GSM1652663 - identifier: GTRD:EXP041005 samples: - biological_condition: none cell: title: 4.5 hpf embryo species: name: Danio rerio tf_name: FOXH1 - datasets: - bed_filename: macs/DAMO/EXP041006.4_5_hpf_embryo.FOXH1/EXP041006.4_5_hpf_embryo.FOXH1.MA0479.1.damo.bed fasta_filename: macs/DAMO/EXP041006.4_5_hpf_embryo.FOXH1/EXP041006.4_5_hpf_embryo.FOXH1.MA0479.1.damo.fa jaspar_id: MA0479.1 profile_name: FOXH1 synonyms: - FAST-1 - FAST1 - TGF-beta/activin signal transducer - fast-2 - forkhead activin signal transducer 2 - forkhead activin signal transducer-1 - forkhead box H1 - forkhead box protein H1 - hFAST-1 folder: EXP041006.4_5_hpf_embryo.FOXH1 references: - identifier: GEO:GSM1652664 - identifier: PUBMED:25869585 - identifier: GEO:GSE67648 - identifier: GTRD:EXP041006 samples: - biological_condition: Squint injection cell: title: 4.5 hpf embryo species: name: Danio rerio tf_name: FOXH1 - datasets: - bed_filename: macs/DAMO/EXP040985.embryos_late_blastula.SOX2/EXP040985.embryos_late_blastula.SOX2.MA0142.1.damo.bed fasta_filename: macs/DAMO/EXP040985.embryos_late_blastula.SOX2/EXP040985.embryos_late_blastula.SOX2.MA0142.1.damo.fa jaspar_id: MA0142.1 profile_name: Pou5f1::Sox2 synonyms: - NF-A3 - Oct-3 - Oct-3/4 - Oct-4 - Oct3 - Oct3/4 - Oct4 - Otf-3 - Otf-4 - Otf3 - Otf3-rs7 - Otf3g - Otf4 - POU domain class 5 transcription factor 1 transcript variant 2 oct4b' - POU domain class 5 transcription factor 1 transcript variant 3 oct4b - POU domain, class 5, transcription factor 1 - SRY (sex determining region Y)-box 2 - SRY-box containing gene 2 - Sox-2 - lcc - octamer-binding protein 3 - octamer-binding protein 4 - octamer-binding transcription factor 3 - octamer-binding transcription factor 4 alternative - transcription factor SOX-2 - ysb - bed_filename: macs/DAMO/EXP040985.embryos_late_blastula.SOX2/EXP040985.embryos_late_blastula.SOX2.MA0143.4.damo.bed fasta_filename: macs/DAMO/EXP040985.embryos_late_blastula.SOX2/EXP040985.embryos_late_blastula.SOX2.MA0143.4.damo.fa jaspar_id: MA0143.4 profile_name: SOX2 synonyms: - ANOP3 - MCOPS3 - SRY (sex determining region Y)-box 2 - SRY-box 2 - SRY-box transcription factor 2 - SRY-related HMG-box gene 2 - sex determining region Y-box 2 - transcription factor SOX-2 - transcription factor SOX2 folder: EXP040985.embryos_late_blastula.SOX2 references: - identifier: PUBMED:23950494 - identifier: GEO:GSE39780 - identifier: GEO:GSM978984 - identifier: GTRD:EXP040985 samples: - biological_condition: '' cell: title: embryos, late blastula species: name: Danio rerio tf_name: SOX2 - datasets: - bed_filename: macs/DAMO/EXP041000.10S_embryo.TBX6/EXP041000.10S_embryo.TBX6.MA1567.1.damo.bed fasta_filename: macs/DAMO/EXP041000.10S_embryo.TBX6/EXP041000.10S_embryo.TBX6.MA1567.1.damo.fa jaspar_id: MA1567.1 profile_name: TBX6 synonyms: - SCDO5 - T-box 6 - T-box protein 6 - T-box transcription factor 6 - T-box transcription factor TBX6 folder: EXP041000.10S_embryo.TBX6 references: - identifier: GEO:GSM1379661 - identifier: PUBMED:25725067 - identifier: GEO:GSE57332 - identifier: GTRD:EXP041000 samples: - biological_condition: '' cell: title: 10S embryo species: name: Danio rerio tf_name: TBX6