Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&q=LFY&summary=true
{
"count": 5,
"next": null,
"previous": null,
"results": [
{
"folder": "EXP041220.complete_15_day-old_seedlings.LFY",
"tf_name": "LFY",
"samples": [
{
"cell": {
"title": "complete 15 day-old seedlings"
},
"biological_condition": "plants that overexpressed LFY (35S:LFY)"
}
],
"references": [
{
"identifier": "GEO:GSM605656"
},
{
"identifier": "GEO:GSE24568"
},
{
"identifier": "PUBMED:21515819"
},
{
"identifier": "GTRD:EXP041220"
}
],
"species": {
"name": "Arabidopsis thaliana"
},
"datasets": [
{
"jaspar_id": "MA0590.1",
"bed_filename": "macs/DAMO/EXP041220.complete_15_day-old_seedlings.LFY/EXP041220.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed",
"fasta_filename": "macs/DAMO/EXP041220.complete_15_day-old_seedlings.LFY/EXP041220.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa",
"profile_name": "LFY",
"synonyms": [
"AT5G61850",
"LEAFY",
"LEAFY 3",
"LFY3",
"MAC9.13",
"MAC9_13",
"floral meristem identity control protein LEAFY (LFY)"
]
}
]
},
{
"folder": "EXP041221.complete_15_day-old_seedlings.LFY",
"tf_name": "LFY",
"samples": [
{
"cell": {
"title": "complete 15 day-old seedlings"
},
"biological_condition": "plants that overexpressed LFY (35S:LFY)"
}
],
"references": [
{
"identifier": "PUBMED:21515819"
},
{
"identifier": "GEO:GSE24568"
},
{
"identifier": "GEO:GSM605657"
},
{
"identifier": "GTRD:EXP041221"
}
],
"species": {
"name": "Arabidopsis thaliana"
},
"datasets": [
{
"jaspar_id": "MA0590.1",
"bed_filename": "macs/DAMO/EXP041221.complete_15_day-old_seedlings.LFY/EXP041221.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed",
"fasta_filename": "macs/DAMO/EXP041221.complete_15_day-old_seedlings.LFY/EXP041221.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa",
"profile_name": "LFY",
"synonyms": [
"AT5G61850",
"LEAFY",
"LEAFY 3",
"LFY3",
"MAC9.13",
"MAC9_13",
"floral meristem identity control protein LEAFY (LFY)"
]
}
]
},
{
"folder": "EXP041354.complete_15_day-old_seedlings.LFY",
"tf_name": "LFY",
"samples": [
{
"cell": {
"title": "complete 15 day-old seedlings"
},
"biological_condition": "p35S:LFY; CA26-15 strain"
}
],
"references": [
{
"identifier": "GEO:GSM1566965"
},
{
"identifier": "GEO:GSE64245"
},
{
"identifier": "PUBMED:27097556"
},
{
"identifier": "GEO:GSM1566964"
},
{
"identifier": "GTRD:EXP041354"
}
],
"species": {
"name": "Arabidopsis thaliana"
},
"datasets": [
{
"jaspar_id": "MA0590.1",
"bed_filename": "macs/DAMO/EXP041354.complete_15_day-old_seedlings.LFY/EXP041354.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed",
"fasta_filename": "macs/DAMO/EXP041354.complete_15_day-old_seedlings.LFY/EXP041354.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa",
"profile_name": "LFY",
"synonyms": [
"AT5G61850",
"LEAFY",
"LEAFY 3",
"LFY3",
"MAC9.13",
"MAC9_13",
"floral meristem identity control protein LEAFY (LFY)"
]
}
]
},
{
"folder": "EXP041355.complete_15_day-old_seedlings.LFY",
"tf_name": "LFY",
"samples": [
{
"cell": {
"title": "complete 15 day-old seedlings"
},
"biological_condition": "p35S:LFYTERE; CA29-17 strain"
}
],
"references": [
{
"identifier": "GEO:GSM1566966"
},
{
"identifier": "GEO:GSE64245"
},
{
"identifier": "GEO:GSM1566967"
},
{
"identifier": "PUBMED:27097556"
},
{
"identifier": "GTRD:EXP041355"
}
],
"species": {
"name": "Arabidopsis thaliana"
},
"datasets": [
{
"jaspar_id": "MA0590.1",
"bed_filename": "macs/DAMO/EXP041355.complete_15_day-old_seedlings.LFY/EXP041355.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed",
"fasta_filename": "macs/DAMO/EXP041355.complete_15_day-old_seedlings.LFY/EXP041355.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa",
"profile_name": "LFY",
"synonyms": [
"AT5G61850",
"LEAFY",
"LEAFY 3",
"LFY3",
"MAC9.13",
"MAC9_13",
"floral meristem identity control protein LEAFY (LFY)"
]
}
]
},
{
"folder": "EXP041523.inflorescence.LFY",
"tf_name": "LFY",
"samples": [
{
"cell": {
"title": "inflorescence"
},
"biological_condition": "treatment with a solution containing 10 μM dexamethasone (Sigma-Aldrich), 0.01% (v/v) ethanol, and 0.015% (v/v) Silwet L-77 (De Sangosse)."
}
],
"references": [
{
"identifier": "GEO:GSE96806"
},
{
"identifier": "PUBMED:28385730"
},
{
"identifier": "GEO:GSM2544348"
},
{
"identifier": "GTRD:EXP041523"
}
],
"species": {
"name": "Arabidopsis thaliana"
},
"datasets": [
{
"jaspar_id": "MA0590.1",
"bed_filename": "macs/DAMO/EXP041523.inflorescence.LFY/EXP041523.inflorescence.LFY.MA0590.1.damo.bed",
"fasta_filename": "macs/DAMO/EXP041523.inflorescence.LFY/EXP041523.inflorescence.LFY.MA0590.1.damo.fa",
"profile_name": "LFY",
"synonyms": [
"AT5G61850",
"LEAFY",
"LEAFY 3",
"LFY3",
"MAC9.13",
"MAC9_13",
"floral meristem identity control protein LEAFY (LFY)"
]
}
]
}
]
}