Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json
, jsonp
, yaml
,
bed
, and also api
for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&q=&species=7227&summary=true
https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=7227&summary=true", "previous": null, "results": [ { "folder": "EXP045751.whole_organism_development_stage_embryonic.BCD", "tf_name": "BCD", "samples": [ { "cell": { "title": "whole organism (development stage: embryonic)" }, "biological_condition": "blastoderm; Oregon R strain" } ], "references": [ { "identifier": "GEO:GSM1228847" }, { "identifier": "GEO:GSE50771" }, { "identifier": "GTRD:EXP045751" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0212.1", "bed_filename": "macs/DAMO/EXP045751.whole_organism_development_stage_embryonic.BCD/EXP045751.whole_organism_development_stage_embryonic.BCD.MA0212.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045751.whole_organism_development_stage_embryonic.BCD/EXP045751.whole_organism_development_stage_embryonic.BCD.MA0212.1.damo.fa", "profile_name": "bcd", "synonyms": [ "BCD", "BG:DS00276.7", "Bcd", "Bicoid", "CG1034", "CG1034-PA", "CG1034-PD", "CG1034-PE", "CG1034-PF", "CG1034-PG", "Dmel\\\\CG1034", "Dmel_CG1034", "PRD gene 4", "bcd-PA", "bcd-PD", "bcd-PE", "bcd-PF", "bcd-PG", "bic", "bicoid", "multimorph", "mum", "prd4" ] } ] }, { "folder": "EXP045816.1-3_h_embryo.BCD", "tf_name": "BCD", "samples": [ { "cell": { "title": "1-3 h embryo" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1332671" }, { "identifier": "GEO:GSM1332670" }, { "identifier": "PUBMED:24637116" }, { "identifier": "GEO:GSE55256" }, { "identifier": "GTRD:EXP045816" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0212.1", "bed_filename": "macs/DAMO/EXP045816.1-3_h_embryo.BCD/EXP045816.1-3_h_embryo.BCD.MA0212.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045816.1-3_h_embryo.BCD/EXP045816.1-3_h_embryo.BCD.MA0212.1.damo.fa", "profile_name": "bcd", "synonyms": [ "BCD", "BG:DS00276.7", "Bcd", "Bicoid", "CG1034", "CG1034-PA", "CG1034-PD", "CG1034-PE", "CG1034-PF", "CG1034-PG", "Dmel\\\\CG1034", "Dmel_CG1034", "PRD gene 4", "bcd-PA", "bcd-PD", "bcd-PE", "bcd-PF", "bcd-PG", "bic", "bicoid", "multimorph", "mum", "prd4" ] } ] }, { "folder": "ENCSR533CXT.whole_organism_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "whole organism (development stage: embryonic)" }, "biological_condition": "strain: BEAF-32-GFP, genotype: y[1] w[*]; PBac{y[+mDint2] w[+mC]=BEAF-32-GFP.FPTB}VK00033, sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR533CXT" }, { "identifier": "GTRD:EXP044177" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/ENCSR533CXT.whole_organism_development_stage_embryonic.BEAF-32/ENCSR533CXT.whole_organism_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/ENCSR533CXT.whole_organism_development_stage_embryonic.BEAF-32/ENCSR533CXT.whole_organism_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045433.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "20-HE 0 hrs" } ], "references": [ { "identifier": "PUBMED:21981916" }, { "identifier": "GEO:GSE30740" }, { "identifier": "PUBMED:23403565" }, { "identifier": "GEO:GSM762845" }, { "identifier": "GTRD:EXP045433" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045433.Kc167_development_stage_embryonic.BEAF-32/EXP045433.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045433.Kc167_development_stage_embryonic.BEAF-32/EXP045433.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045434.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "20-HE 3 hrs" } ], "references": [ { "identifier": "PUBMED:23403565" }, { "identifier": "PUBMED:21981916" }, { "identifier": "GEO:GSM762846" }, { "identifier": "GEO:GSE30740" }, { "identifier": "GTRD:EXP045434" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045434.Kc167_development_stage_embryonic.BEAF-32/EXP045434.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045434.Kc167_development_stage_embryonic.BEAF-32/EXP045434.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045435.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "20-HE 48 hrs" } ], "references": [ { "identifier": "GEO:GSM762847" }, { "identifier": "PUBMED:23403565" }, { "identifier": "PUBMED:21981916" }, { "identifier": "GEO:GSE30740" }, { "identifier": "GTRD:EXP045435" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045435.Kc167_development_stage_embryonic.BEAF-32/EXP045435.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045435.Kc167_development_stage_embryonic.BEAF-32/EXP045435.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045458.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "Interphase" } ], "references": [ { "identifier": "GEO:GSM807545" }, { "identifier": "GEO:GSE32584" }, { "identifier": "PUBMED:23403565" }, { "identifier": "GTRD:EXP045458" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045458.Kc167_development_stage_embryonic.BEAF-32/EXP045458.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045458.Kc167_development_stage_embryonic.BEAF-32/EXP045458.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045459.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "Mitosis" } ], "references": [ { "identifier": "GEO:GSE32584" }, { "identifier": "GEO:GSM807546" }, { "identifier": "PUBMED:23403565" }, { "identifier": "GTRD:EXP045459" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045459.Kc167_development_stage_embryonic.BEAF-32/EXP045459.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045459.Kc167_development_stage_embryonic.BEAF-32/EXP045459.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045924.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "heat shock" } ], "references": [ { "identifier": "GEO:GSM1535962" }, { "identifier": "GEO:GSE62904" }, { "identifier": "PUBMED:25818644" }, { "identifier": "GTRD:EXP045924" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045924.Kc167_development_stage_embryonic.BEAF-32/EXP045924.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045924.Kc167_development_stage_embryonic.BEAF-32/EXP045924.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] }, { "folder": "EXP045925.Kc167_development_stage_embryonic.BEAF-32", "tf_name": "BEAF-32", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "normal temperature" } ], "references": [ { "identifier": "PUBMED:25818644" }, { "identifier": "GEO:GSM1535963" }, { "identifier": "GEO:GSE62904" }, { "identifier": "GTRD:EXP045925" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0529.2", "bed_filename": "macs/DAMO/EXP045925.Kc167_development_stage_embryonic.BEAF-32/EXP045925.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.bed", "fasta_filename": "macs/DAMO/EXP045925.Kc167_development_stage_embryonic.BEAF-32/EXP045925.Kc167_development_stage_embryonic.BEAF-32.MA0529.2.damo.fa", "profile_name": "BEAF-32", "synonyms": null } ] } ] }{ "count": 109, "next": "