Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&q=&species=6239&summary=true
{ "count": 91, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=6239&summary=true", "previous": null, "results": [ { "folder": "ENCSR411OOP.Whole_worms_developmental_stage_young_adults.ATF-7", "tf_name": "ATF-7", "samples": [ { "cell": { "title": "Whole worms (developmental stage: young adults)" }, "biological_condition": "strain: OP638, genotype: unc-119(tm4063) III; wgIs638., sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR411OOP" }, { "identifier": "GTRD:EXP044036" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1438.1", "bed_filename": "macs/DAMO/ENCSR411OOP.Whole_worms_developmental_stage_young_adults.ATF-7/ENCSR411OOP.Whole_worms_developmental_stage_young_adults.ATF-7.MA1438.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR411OOP.Whole_worms_developmental_stage_young_adults.ATF-7/ENCSR411OOP.Whole_worms_developmental_stage_young_adults.ATF-7.MA1438.1.damo.fa", "profile_name": "atf-7", "synonyms": null } ] }, { "folder": "ENCSR744BON.Whole_worms_developmental_stage_L2.BLMP-1", "tf_name": "BLMP-1", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L2)" }, "biological_condition": "strain: OP109, genotype: unc-119(ed3) III; wgIs109., sex:hermaphrodite" } ], "references": [ { "identifier": "ENCODE:ENCSR744BON" }, { "identifier": "GTRD:EXP043499" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0537.1", "bed_filename": "macs/DAMO/ENCSR744BON.Whole_worms_developmental_stage_L2.BLMP-1/ENCSR744BON.Whole_worms_developmental_stage_L2.BLMP-1.MA0537.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR744BON.Whole_worms_developmental_stage_L2.BLMP-1/ENCSR744BON.Whole_worms_developmental_stage_L2.BLMP-1.MA0537.1.damo.fa", "profile_name": "blmp-1", "synonyms": [ "B lymphocyte-induced maturation protein 1 homolog", "CELE_F25D7.3" ] } ] }, { "folder": "ENCSR304JRJ.Whole_worms_mixed-stage_embryos.BLMP-1", "tf_name": "BLMP-1", "samples": [ { "cell": { "title": "Whole worms (mixed-stage embryos)" }, "biological_condition": "strain: OP109, genotype: unc-119(ed3) III; wgIs109., sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR304JRJ" }, { "identifier": "GTRD:EXP043991" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0537.1", "bed_filename": "macs/DAMO/ENCSR304JRJ.Whole_worms_mixed-stage_embryos.BLMP-1/ENCSR304JRJ.Whole_worms_mixed-stage_embryos.BLMP-1.MA0537.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR304JRJ.Whole_worms_mixed-stage_embryos.BLMP-1/ENCSR304JRJ.Whole_worms_mixed-stage_embryos.BLMP-1.MA0537.1.damo.fa", "profile_name": "blmp-1", "synonyms": [ "B lymphocyte-induced maturation protein 1 homolog", "CELE_F25D7.3" ] } ] }, { "folder": "ENCSR232QHU.Whole_worms_developmental_stage_L1.BLMP-1", "tf_name": "BLMP-1", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L1)" }, "biological_condition": "strain: OP109, genotype: unc-119(ed3) III; wgIs109., sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR232QHU" }, { "identifier": "GTRD:EXP044224" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0537.1", "bed_filename": "macs/DAMO/ENCSR232QHU.Whole_worms_developmental_stage_L1.BLMP-1/ENCSR232QHU.Whole_worms_developmental_stage_L1.BLMP-1.MA0537.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR232QHU.Whole_worms_developmental_stage_L1.BLMP-1/ENCSR232QHU.Whole_worms_developmental_stage_L1.BLMP-1.MA0537.1.damo.fa", "profile_name": "blmp-1", "synonyms": [ "B lymphocyte-induced maturation protein 1 homolog", "CELE_F25D7.3" ] } ] }, { "folder": "ENCSR993GFS.Whole_worms_developmental_stage_young_adults.CEBP-1", "tf_name": "CEBP-1", "samples": [ { "cell": { "title": "Whole worms (developmental stage: young adults)" }, "biological_condition": "strain: OP563, genotype: unc-119(tm4063) III; wgIs563., sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR993GFS" }, { "identifier": "GTRD:EXP043481" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1444.1", "bed_filename": "macs/DAMO/ENCSR993GFS.Whole_worms_developmental_stage_young_adults.CEBP-1/ENCSR993GFS.Whole_worms_developmental_stage_young_adults.CEBP-1.MA1444.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR993GFS.Whole_worms_developmental_stage_young_adults.CEBP-1/ENCSR993GFS.Whole_worms_developmental_stage_young_adults.CEBP-1.MA1444.1.damo.fa", "profile_name": "cebp-1", "synonyms": null } ] }, { "folder": "EXP044377.Whole_worms_mix_stage_culture.CEBP-1", "tf_name": "CEBP-1", "samples": [ { "cell": { "title": "Whole worms (mix stage culture)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE83330" }, { "identifier": "PUBMED:27927209" }, { "identifier": "GEO:GSM2199579" }, { "identifier": "GTRD:EXP044377" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1444.1", "bed_filename": "macs/DAMO/EXP044377.Whole_worms_mix_stage_culture.CEBP-1/EXP044377.Whole_worms_mix_stage_culture.CEBP-1.MA1444.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044377.Whole_worms_mix_stage_culture.CEBP-1/EXP044377.Whole_worms_mix_stage_culture.CEBP-1.MA1444.1.damo.fa", "profile_name": "cebp-1", "synonyms": null } ] }, { "folder": "ENCSR738KZF.Whole_worms_developmental_stage_L4young_adults.CEH-28", "tf_name": "CEH-28", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L4/young adults)" }, "biological_condition": "strain: OP241, genotype: unc-119(ed3) III; wgIs241., sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR738KZF" }, { "identifier": "GTRD:EXP043554" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1445.1", "bed_filename": "macs/DAMO/ENCSR738KZF.Whole_worms_developmental_stage_L4young_adults.CEH-28/ENCSR738KZF.Whole_worms_developmental_stage_L4young_adults.CEH-28.MA1445.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR738KZF.Whole_worms_developmental_stage_L4young_adults.CEH-28/ENCSR738KZF.Whole_worms_developmental_stage_L4young_adults.CEH-28.MA1445.1.damo.fa", "profile_name": "ceh-28", "synonyms": [ "CELE_K03A11.3", "Homeobox protein ceh-28" ] } ] }, { "folder": "ENCSR701FUV.Whole_worms_developmental_stage_L3.CEH-28", "tf_name": "CEH-28", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L3)" }, "biological_condition": "strain: OP241, genotype: unc-119(ed3) III; wgIs241., sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR701FUV" }, { "identifier": "GTRD:EXP044159" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1445.1", "bed_filename": "macs/DAMO/ENCSR701FUV.Whole_worms_developmental_stage_L3.CEH-28/ENCSR701FUV.Whole_worms_developmental_stage_L3.CEH-28.MA1445.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR701FUV.Whole_worms_developmental_stage_L3.CEH-28/ENCSR701FUV.Whole_worms_developmental_stage_L3.CEH-28.MA1445.1.damo.fa", "profile_name": "ceh-28", "synonyms": [ "CELE_K03A11.3", "Homeobox protein ceh-28" ] } ] }, { "folder": "ENCSR844VCY.Whole_worms_developmental_stage_late_embryo.CEH-48", "tf_name": "CEH-48", "samples": [ { "cell": { "title": "Whole worms (developmental stage: late embryo)" }, "biological_condition": "strain: OP631, genotype: unc-119(tm4063) III; wgIs631, sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR844VCY" }, { "identifier": "GTRD:EXP043500" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0921.1", "bed_filename": "macs/DAMO/ENCSR844VCY.Whole_worms_developmental_stage_late_embryo.CEH-48/ENCSR844VCY.Whole_worms_developmental_stage_late_embryo.CEH-48.MA0921.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR844VCY.Whole_worms_developmental_stage_late_embryo.CEH-48/ENCSR844VCY.Whole_worms_developmental_stage_late_embryo.CEH-48.MA0921.1.damo.fa", "profile_name": "ceh-48", "synonyms": null } ] }, { "folder": "EXP042320.Whole_worms_developmental_stage_L4young_adults.DAF-16", "tf_name": "DAF-16", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L4/young adults)" }, "biological_condition": "daf-16 transgenic (GFP-tagged) worm; strain: TJ356" } ], "references": [ { "identifier": "GEO:GSE15567" }, { "identifier": "GEO:GSM389646" }, { "identifier": "GTRD:EXP042320" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1446.1", "bed_filename": "macs/DAMO/EXP042320.Whole_worms_developmental_stage_L4young_adults.DAF-16/EXP042320.Whole_worms_developmental_stage_L4young_adults.DAF-16.MA1446.1.damo.bed", "fasta_filename": "macs/DAMO/EXP042320.Whole_worms_developmental_stage_L4young_adults.DAF-16/EXP042320.Whole_worms_developmental_stage_L4young_adults.DAF-16.MA1446.1.damo.fa", "profile_name": "daf-16", "synonyms": [ "CELE_R13H8.1", "Fork-head domain-containing protein;Forkhead box protein O" ] } ] } ] }