Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&q=&species=4932&summary=true
{ "count": 29, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=4932&summary=true", "previous": null, "results": [ { "folder": "EXP042142.meiotic_culture.ABF1", "tf_name": "ABF1", "samples": [ { "cell": { "title": "meiotic culture" }, "biological_condition": " Abf1 TAP-tagged strain" } ], "references": [ { "identifier": "GEO:GSM2143113" }, { "identifier": "GEO:GSE81112" }, { "identifier": "PUBMED:28158860" }, { "identifier": "GTRD:EXP042142" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0265.1", "bed_filename": "macs/DAMO/EXP042142.meiotic_culture.ABF1/EXP042142.meiotic_culture.ABF1.MA0265.1.damo.bed", "fasta_filename": "macs/DAMO/EXP042142.meiotic_culture.ABF1/EXP042142.meiotic_culture.ABF1.MA0265.1.damo.fa", "profile_name": "ABF1", "synonyms": [ "BAF1", "DNA-binding protein ABF1", "EBF2", "OBF1", "REB2", "SBF1", "YKL112W" ] } ] }, { "folder": "EXP041914.SK1_meiotic_cells_4_hours.BAS1", "tf_name": "BAS1", "samples": [ { "cell": { "title": "SK1 meiotic cells (4 hours)" }, "biological_condition": "Bas1-Myc" } ], "references": [ { "identifier": "PUBMED:26245832" }, { "identifier": "GEO:GSE67912" }, { "identifier": "GEO:GSM1657867" }, { "identifier": "GTRD:EXP041914" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0278.1", "bed_filename": "macs/DAMO/EXP041914.SK1_meiotic_cells_4_hours.BAS1/EXP041914.SK1_meiotic_cells_4_hours.BAS1.MA0278.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041914.SK1_meiotic_cells_4_hours.BAS1/EXP041914.SK1_meiotic_cells_4_hours.BAS1.MA0278.1.damo.fa", "profile_name": "BAS1", "synonyms": [ "Bas1p", "YKR099W" ] } ] }, { "folder": "EXP041561.S__cerevisiae_cells.CBF1", "tf_name": "CBF1", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "NoPi; W303 strain" } ], "references": [ { "identifier": "GEO:GSM730521" }, { "identifier": "PUBMED:21700227" }, { "identifier": "GEO:GSE29506" }, { "identifier": "GTRD:EXP041561" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0281.1", "bed_filename": "macs/DAMO/EXP041561.S__cerevisiae_cells.CBF1/EXP041561.S__cerevisiae_cells.CBF1.MA0281.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041561.S__cerevisiae_cells.CBF1/EXP041561.S__cerevisiae_cells.CBF1.MA0281.1.damo.fa", "profile_name": "CBF1", "synonyms": [ "CEP1", "CPF1", "Cbf1p", "YJR060W" ] } ] }, { "folder": "EXP041562.S__cerevisiae_cells.CBF1", "tf_name": "CBF1", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "HighPi; W303 strain" } ], "references": [ { "identifier": "GEO:GSM730522" }, { "identifier": "PUBMED:21700227" }, { "identifier": "GEO:GSE29506" }, { "identifier": "GTRD:EXP041562" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0281.1", "bed_filename": "macs/DAMO/EXP041562.S__cerevisiae_cells.CBF1/EXP041562.S__cerevisiae_cells.CBF1.MA0281.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041562.S__cerevisiae_cells.CBF1/EXP041562.S__cerevisiae_cells.CBF1.MA0281.1.damo.fa", "profile_name": "CBF1", "synonyms": [ "CEP1", "CPF1", "Cbf1p", "YJR060W" ] } ] }, { "folder": "EXP041856.S__cerevisiae_cells.FHL1", "tf_name": "FHL1", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "myc-tagged Fhl1" } ], "references": [ { "identifier": "PUBMED:25085421" }, { "identifier": "GEO:GSE61596" }, { "identifier": "GEO:GSM1509037" }, { "identifier": "GTRD:EXP041856" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0295.1", "bed_filename": "macs/DAMO/EXP041856.S__cerevisiae_cells.FHL1/EXP041856.S__cerevisiae_cells.FHL1.MA0295.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041856.S__cerevisiae_cells.FHL1/EXP041856.S__cerevisiae_cells.FHL1.MA0295.1.damo.fa", "profile_name": "FHL1", "synonyms": [ "Fhl1p", "SPP42", "YPR104C" ] } ] }, { "folder": "EXP041858.S__cerevisiae_cells.FHL1", "tf_name": "FHL1", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "myc-tagged Fhl1 with deletion of forkhead domain (Fhl1-ΔFH-Myc)" } ], "references": [ { "identifier": "GEO:GSE61596" }, { "identifier": "GEO:GSM1509039" }, { "identifier": "PUBMED:25085421" }, { "identifier": "GTRD:EXP041858" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0295.1", "bed_filename": "macs/DAMO/EXP041858.S__cerevisiae_cells.FHL1/EXP041858.S__cerevisiae_cells.FHL1.MA0295.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041858.S__cerevisiae_cells.FHL1/EXP041858.S__cerevisiae_cells.FHL1.MA0295.1.damo.fa", "profile_name": "FHL1", "synonyms": [ "Fhl1p", "SPP42", "YPR104C" ] } ] }, { "folder": "EXP041794.S__cerevisiae_cells.GCN4", "tf_name": "GCN4", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "W303 (Z1256); GCN4-myc" } ], "references": [ { "identifier": "PUBMED:26772747" }, { "identifier": "GEO:GSM1470160" }, { "identifier": "GEO:GSE60281" }, { "identifier": "GTRD:EXP041794" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0303.1", "bed_filename": "macs/DAMO/EXP041794.S__cerevisiae_cells.GCN4/EXP041794.S__cerevisiae_cells.GCN4.MA0303.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041794.S__cerevisiae_cells.GCN4/EXP041794.S__cerevisiae_cells.GCN4.MA0303.1.damo.fa", "profile_name": "GCN4", "synonyms": [ "AAS101", "AAS3", "ARG9", "YEL009C", "amino acid starvation-responsive transcription factor GCN4" ] } ] }, { "folder": "EXP041796.S__cerevisiae_cells.GCN4", "tf_name": "GCN4", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "W303 (Z1256); GCN4-myc" } ], "references": [ { "identifier": "PUBMED:26772747" }, { "identifier": "GEO:GSE60281" }, { "identifier": "GEO:GSM1470164" }, { "identifier": "GTRD:EXP041796" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0303.1", "bed_filename": "macs/DAMO/EXP041796.S__cerevisiae_cells.GCN4/EXP041796.S__cerevisiae_cells.GCN4.MA0303.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041796.S__cerevisiae_cells.GCN4/EXP041796.S__cerevisiae_cells.GCN4.MA0303.1.damo.fa", "profile_name": "GCN4", "synonyms": [ "AAS101", "AAS3", "ARG9", "YEL009C", "amino acid starvation-responsive transcription factor GCN4" ] } ] }, { "folder": "EXP041800.S__cerevisiae_cells.GCN4", "tf_name": "GCN4", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "W303 (Z1256); GCN4-myc; RTG3-knockout (co-factor)" } ], "references": [ { "identifier": "GEO:GSE60281" }, { "identifier": "GEO:GSM1470172" }, { "identifier": "PUBMED:26772747" }, { "identifier": "GTRD:EXP041800" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0303.1", "bed_filename": "macs/DAMO/EXP041800.S__cerevisiae_cells.GCN4/EXP041800.S__cerevisiae_cells.GCN4.MA0303.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041800.S__cerevisiae_cells.GCN4/EXP041800.S__cerevisiae_cells.GCN4.MA0303.1.damo.fa", "profile_name": "GCN4", "synonyms": [ "AAS101", "AAS3", "ARG9", "YEL009C", "amino acid starvation-responsive transcription factor GCN4" ] } ] }, { "folder": "EXP041801.S__cerevisiae_cells.GCN4", "tf_name": "GCN4", "samples": [ { "cell": { "title": "S. cerevisiae cells" }, "biological_condition": "W303 (Z1256); GCN4-myc; RTG3-knockout (co-factor)" } ], "references": [ { "identifier": "PUBMED:26772747" }, { "identifier": "GEO:GSM1470174" }, { "identifier": "GEO:GSE60281" }, { "identifier": "GTRD:EXP041801" } ], "species": { "name": "Saccharomyces cerevisiae" }, "datasets": [ { "jaspar_id": "MA0303.1", "bed_filename": "macs/DAMO/EXP041801.S__cerevisiae_cells.GCN4/EXP041801.S__cerevisiae_cells.GCN4.MA0303.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041801.S__cerevisiae_cells.GCN4/EXP041801.S__cerevisiae_cells.GCN4.MA0303.1.damo.fa", "profile_name": "GCN4", "synonyms": [ "AAS101", "AAS3", "ARG9", "YEL009C", "amino acid starvation-responsive transcription factor GCN4" ] } ] } ] }